Insertion junction: CLIP2.010812_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010812
Chromosome:chromosome 1
Location:4020516
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026450 SRP35,SRS1 Serine/arginine-rich pre-mRNA splicing factor; (1 of 2) K12890 - splicing factor, arginine/serine-rich 1/9 (SFRS1_9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGCTGAGCCCCAACCACCCTACCCCATTGTTCACCTTGAGGTCCACGC
Internal bar code:CGCACACGTAAACTACCAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2538
LEAP-Seq percent confirming:93.2432
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCCCTTGCATCTTCTCC
Suggested primer 2:CAAGCGGCAACCTTAATCCG