Gene: Cre01.g026450
Overview
| Common name: | SRP35,SRS1 |
| Defline: | Serine/arginine-rich pre-mRNA splicing factor; (1 of 2) K12890 - splicing factor, arginine/serine-rich 1/9 (SFRS1_9) |
| Description: | Serine/arginine-rich pre-mRNA splicing factor protein of the SF2/ASF subfamily; contains two RNA recognition motifs (RRM); |
| Synonyms: | SRS1,SRP35,Cre01.g026450.t1.1,g607.t1 |
| Chromosome: | chromosome 1 |
Protein Localization
A plasmid for expressing Cre01.g026450 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre01.g026450-Venus-3xFLAG
Imaged strain: CSI_LW09H12
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
nucleus/nucleoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.010812_1 | CLIP2.010812 | intron | 80 | 6.1 |
| CLIP2.010812_2 | CLIP2.010812 | intron | 80 | 6.1 |
| CLIP2.013329_1 | CLIP2.013329 | CDS | 80 | 6.1 |
| CLIP2.059479_1 | CLIP2.059479 | outside_mRNA | 80 | 6.1 |
| CLIP2.059479_2 | CLIP2.059479 | outside_mRNA | 80 | 6.1 |
| CLIP2.064021_1 | CLIP2.064021 | 3'UTR | 80 | 6.1 |
| CLIP2.064021_2 | CLIP2.064021 | 3'UTR | 80 | 6.1 |
| CLIP2.073685_1 | CLIP2.073685 | 5'UTR | 80 | 6.1 |
| CLIP2.073685_2 | CLIP2.073685 | 5'UTR | 80 | 6.1 |
| CLIP2.075720_1 | CLIP2.075720 | 3'UTR | 80 | 6.1 |
| CLIP2.075720_2 | CLIP2.075720 | 3'UTR | 80 | 6.1 |
| CLIP2.078092_1 | CLIP2.078092 | 5'UTR_intron | 80 | 6.1 |
| CLIP2.078092_2 | CLIP2.078092 | 5'UTR_intron | 80 | 6.1 |
| LMJ.RY0402.129283_2 | LMJ.RY0402.129283 | 5'UTR_intron | 73 | 5.5 |
| LMJ.RY0402.179015_1 | LMJ.RY0402.179015 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.195598_1 | LMJ.RY0402.195598 | 5'UTR_intron | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00076 |
| PANTHER: | PTHR24012 |
| KEGG_ec: | |
| KEGG_orthology: | K12890 |
| KOG: | KOG0105 |
| Gene ontology terms:: | GO:0003676 |
| Best arabidopsis TAIR name: | AT3G49430 |
| Best arabidopsis TAIR symbol: | ATSRP34,SR1,SRP34 |
| Best arabidopsis TAIR defline: | SER/ARG-rich protein 34A |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.