Insertion junction: CLIP2.075720_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075720
Chromosome:chromosome 1
Location:4018555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026400 EXS1 (1 of 1) PF03124 - EXS family (EXS); ERD1 homolog 3'UTR
Cre01.g026450 SRP35,SRS1 Serine/arginine-rich pre-mRNA splicing factor; (1 of 2) K12890 - splicing factor, arginine/serine-rich 1/9 (SFRS1_9) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGAATTACACATATTAAAGGGACTCCGCCGTTGCATCCGATAATCCG
Internal bar code:TTCACTGACGATAAGCTTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4029
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTCAGTTGGCTTTGTGC
Suggested primer 2:GGGAATCAGAATGGCCGACA