Insertion junction: CLIP2.011026_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011026
Chromosome:chromosome 16
Location:5181359
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685000 (1 of 3) PTHR13748//PTHR13748:SF43 - COBW-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGACTTCTTCTCCGCCATGAGGTCGTTCATGAACATGTTGAAGCGGTAC
Internal bar code:ATCTTTAAGATTGTTTGGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3439
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:104
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:112

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGCTGCTCGAATGCCTG
Suggested primer 2:CCCAGCCACAGCCAAATAGA