Gene: Cre16.g685000
Overview
| Common name: | |
| Defline: | (1 of 3) PTHR13748//PTHR13748:SF43 - COBW-RELATED // SUBFAMILY NOT NAMED |
| Description: | Contains PF07683, CobW_C domain; missing GTPase domain; One of three paralogous tandem genes (Cre16.g685000, Cre16.g685050, Cre16.g685100) |
| Synonyms: | Cre16.g685000.t1.1,g16398.t1 |
| Chromosome: | chromosome 16 |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_FC1C04
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
cytosol/cytosol (strong signal)
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
 |
| Venus Venus+Chlorophyll |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.011026_3 | CLIP2.011026 | CDS | 80 | 6.1 |
| CLIP2.035591_1 | CLIP2.035591 | intron | 80 | 6.1 |
| CLIP2.035591_2 | CLIP2.035591 | intron | 80 | 6.1 |
| CLIP2.042836_1 | CLIP2.042836 | CDS | 80 | 6.1 |
| CLIP2.042836_2 | CLIP2.042836 | CDS | 80 | 6.1 |
| LMJ.RY0402.101271_2 | LMJ.RY0402.101271 | intron | 73 | 5.5 |
| LMJ.RY0402.107494_1 | LMJ.RY0402.107494 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF07683 |
| PANTHER: | PTHR13748 PTHR13748:SF43 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT1G80480.1 |
| Best arabidopsis TAIR symbol: | PTAC17 |
| Best arabidopsis TAIR defline: | plastid transcriptionally active 17 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.