Insertion junction: CLIP2.042836_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042836
Chromosome:chromosome 16
Location:5181099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685000 (1 of 3) PTHR13748//PTHR13748:SF43 - COBW-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGCACACACATGACAACAACGCACGCAGACTTAGCAGGGTTGGTCAC
Internal bar code:CCCGAGTTCATTTCAGTGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4041
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGCTGCTCGAATGCCTG
Suggested primer 2:CTTGCGTCATGTGCCACAAA