Insertion junction: CLIP2.042836_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.042836
Chromosome:chromosome 16
Location:5181100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685000 (1 of 3) PTHR13748//PTHR13748:SF43 - COBW-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCGGCAACACGAAGTTCGTCGTCCGCGGTTCTCGGGAAGGCCTAGGG
Internal bar code:TATCTACATGAGTAGCTCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5321
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCGTCATGTGCCACAAA
Suggested primer 2:GATTGCTGCTCGAATGCCTG