Insertion junction: CLIP2.035591_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035591
Chromosome:chromosome 16
Location:5181115
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685000 (1 of 3) PTHR13748//PTHR13748:SF43 - COBW-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACAACGCACGCAGACTTAGCAGGGTTGGTCACGCAAAACGGTAACATG
Internal bar code:GAACTATATAAAGTGCTATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1549
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGCTGCTCGAATGCCTG
Suggested primer 2:CTTGCGTCATGTGCCACAAA