Insertion junction: CLIP2.011092_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011092
Chromosome:chromosome 14
Location:2014259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g621000 SPL27 Pre-mRNA splicing factor; (1 of 1) K12869 - crooked neck (CRN, CRNKL1, CLF1, SYF3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGGAGCAGGAGCAGGATGGGCGGCCGGCACGCGGCGGGCGGCGGGG
Internal bar code:TTTCATTGACAAGCCTGTAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:224
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TACGATAGGAAAGCGTCGCC
Suggested primer 2:GTACCCTGTTTACGCTGCCT