| Common name: | SPL27 |
| Defline: | Pre-mRNA splicing factor; (1 of 1) K12869 - crooked neck (CRN, CRNKL1, CLF1, SYF3) |
| Description: | Putative TPR-repeat pre-mRNA splicing factor, related to the Drosophila Crooked Neck (CRN) cell cycle protein which localizes with SR and Sm proteins |
| Synonyms: | Cre14.g621000.t1.1,g14965.t1,SPL27 |
| Chromosome: | chromosome 14 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.011092_1 | CLIP2.011092 | CDS | 80 | 6.1 |
| CLIP2.011092_2 | CLIP2.011092 | CDS | 80 | 6.1 |
| CLIP2.020361_1 | CLIP2.020361 | intron | 80 | 6.1 |
| CLIP2.040881_1 | CLIP2.040881 | intron | 80 | 6.1 |
| CLIP2.040881_2 | CLIP2.040881 | intron | 80 | 6.1 |
| CLIP2.069813_1 | CLIP2.069813 | intron | 63 | 6.1 |
| CLIP2.071196_2 | CLIP2.071196 | intron | 63 | 6.1 |
| CLIP2.074015_3 | CLIP2.074015 | intron | 63 | 6.1 |
| LMJ.RY0402.038509_1 | LMJ.RY0402.038509 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.038509_2 | LMJ.RY0402.038509 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.063450_1 | LMJ.RY0402.063450 | intron | 95 | 5.5 |
| LMJ.RY0402.063450_2 | LMJ.RY0402.063450 | CDS | 95 | 5.5 |
| LMJ.RY0402.080844_1 | LMJ.RY0402.080844 | CDS | 95 | 5.5 |
| LMJ.RY0402.080844_2 | LMJ.RY0402.080844 | CDS | 95 | 5.5 |
| LMJ.RY0402.228912_1 | LMJ.RY0402.228912 | CDS | 73 | 5.5 |
| LMJ.SG0182.000805_1 | LMJ.SG0182.000805 | 3'UTR | 75 | 5.3 |
| LMJ.SG0182.002569_1 | LMJ.SG0182.002569 | intron | 75 | 5.3 |
| PFAM: | PF02184 |
| PANTHER: | PTHR11246 PTHR11246:SF14 |
| KEGG_ec: | |
| KEGG_orthology: | K12869 |
| KOG: | KOG1915 |
| Gene ontology terms:: | GO:0005515, GO:0005622, GO:0006396 |
| Best arabidopsis TAIR name: | AT5G41770 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | crooked neck protein, putative / cell cycle protein, putative |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.