Insertion junction: CLIP2.071196_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071196
Chromosome:chromosome 14
Location:2012580
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g621000 SPL27 Pre-mRNA splicing factor; (1 of 1) K12869 - crooked neck (CRN, CRNKL1, CLF1, SYF3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCAGAGCCCGCAGCCGCCTGCCCCTCCCCCCGCCCCGCGTGTGCCCA
Internal bar code:TATTACCCTTGTAATAGTGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:575
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGAAGGGAGGCAGAGGAG
Suggested primer 2:GTCTTGTTTGCGGGGGTTTC