Insertion junction: CLIP2.040881_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040881
Chromosome:chromosome 14
Location:2013893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g621000 SPL27 Pre-mRNA splicing factor; (1 of 1) K12869 - crooked neck (CRN, CRNKL1, CLF1, SYF3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACGAGCATCGAGGATGGGGGTAGTTTTATGGGGGGCGGGGTTGCGTAA
Internal bar code:CACACCATCCGCTTTGGAAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1587
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTCGGAGGTGGAGAAG
Suggested primer 2:CTCCTCCTGCTTCTCCTCCT