Insertion junction: CLIP2.040881_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040881
Chromosome:chromosome 14
Location:2013892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g621000 SPL27 Pre-mRNA splicing factor; (1 of 1) K12869 - crooked neck (CRN, CRNKL1, CLF1, SYF3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGTTTACGCTGCCTTAACCCCGCAACCGCCACCCCGAACCCCTCCGT
Internal bar code:AGGGGTGGGGCTTTGACAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2176
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCCTGCTTCTCCTCCT
Suggested primer 2:GTGTGTCGGAGGTGGAGAAG