Insertion junction: CLIP2.011371_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011371
Chromosome:chromosome 16
Location:1935451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656150 (1 of 1) PTHR23504:SF1 - PROTEIN T25D3.4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAATGGTCATGCTTCGCACACACTACACGCCGCAACGGCAGCGCTCGCG
Internal bar code:GGAGGCTAAGCAGATAAGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1486
LEAP-Seq percent confirming:73.0769
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCCATATTCGTTCCCGAG
Suggested primer 2:CCTCAACACCAGCAGCTACA