Gene: Cre16.g656150

Overview

Common name:
Defline:(1 of 1) PTHR23504:SF1 - PROTEIN T25D3.4
Description:
Synonyms:g15860.t1,Cre16.g656150.t1.1
Chromosome:chromosome 16

Protein Localization

A plasmid for expressing Cre16.g656150 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre16.g656150-Venus-3xFLAG

Imaged strain: CSI_LW12C11

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.

Classification(s):

shapes in cytoplasm/a few medium puncta|vesicles in cytoplasm

If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.

VenusChlorophyllBright fieldMerged

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.006397_4 CLIP2.006397 3'UTR 80 6.1
CLIP2.011371_1 CLIP2.011371 intron 80 6.1
CLIP2.011371_2 CLIP2.011371 intron 80 6.1
CLIP2.022993_1 CLIP2.022993 CDS 80 6.1
CLIP2.022993_2 CLIP2.022993 CDS 80 6.1
CLIP2.023599_1 CLIP2.023599 intron 80 6.1
CLIP2.023599_2 CLIP2.023599 intron 80 6.1
CLIP2.051891_1 CLIP2.051891 CDS 80 6.1
CLIP2.051891_2 CLIP2.051891 CDS 80 6.1
CLIP2.055872_1 CLIP2.055872 intron 80 6.1
CLIP2.055872_2 CLIP2.055872 intron 80 6.1
LMJ.RY0402.043588_1 LMJ.RY0402.043588 intron 73 5.5
LMJ.RY0402.071016_1 LMJ.RY0402.071016 CDS 58 5.5
LMJ.RY0402.084539_1 LMJ.RY0402.084539 5'UTR 95 5.5
LMJ.RY0402.084539_2 LMJ.RY0402.084539 5'UTR 95 5.5
LMJ.RY0402.086378_3 LMJ.RY0402.086378 5'UTR 73 5.5
LMJ.RY0402.099929_1 LMJ.RY0402.099929 5'UTR 95 5.5
LMJ.RY0402.099929_2 LMJ.RY0402.099929 5'UTR 95 5.5
LMJ.RY0402.118243_1 LMJ.RY0402.118243 5'UTR 95 5.5
LMJ.RY0402.118243_2 LMJ.RY0402.118243 5'UTR 95 5.5
LMJ.RY0402.154213_1 LMJ.RY0402.154213 3'UTR 95 5.5
LMJ.RY0402.154213_2 LMJ.RY0402.154213 3'UTR 95 5.5
LMJ.RY0402.154393_1 LMJ.RY0402.154393 5'UTR 58 5.5
LMJ.RY0402.155749_1 LMJ.RY0402.155749 5'UTR 95 5.5
LMJ.RY0402.155749_2 LMJ.RY0402.155749 5'UTR 95 5.5
LMJ.RY0402.157451_1 LMJ.RY0402.157451 5'UTR 58 5.5
LMJ.RY0402.162046_1 LMJ.RY0402.162046 intron 73 5.5
LMJ.RY0402.167334_2 LMJ.RY0402.167334 CDS 73 5.5
LMJ.RY0402.180559_1 LMJ.RY0402.180559 intron 73 5.5
LMJ.RY0402.183535_2 LMJ.RY0402.183535 3'UTR 95 5.5
LMJ.RY0402.194306_1 LMJ.RY0402.194306 5'UTR 95 5.5
LMJ.RY0402.194306_2 LMJ.RY0402.194306 5'UTR 95 5.5
LMJ.RY0402.216909_4 LMJ.RY0402.216909 5'UTR 58 5.5
LMJ.RY0402.216909_5 LMJ.RY0402.216909 5'UTR 58 5.5
LMJ.RY0402.236425_3 LMJ.RY0402.236425 intron 73 5.5
LMJ.RY0402.241782_1 LMJ.RY0402.241782 5'UTR 95 5.5
LMJ.RY0402.241782_2 LMJ.RY0402.241782 5'UTR 95 5.5
LMJ.RY0402.256969_1 LMJ.RY0402.256969 CDS 58 5.5

Gene Annotations

PFAM:PF07690
PANTHER: PTHR23504 PTHR23504:SF1
KEGG_ec:
KEGG_orthology:
KOG:KOG2816
Gene ontology terms::GO:0016021, GO:0055085
Best arabidopsis TAIR name:AT2G16980
Best arabidopsis TAIR symbol:MEE15
Best arabidopsis TAIR defline:Major facilitator superfamily protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Tunicamycin, screen 1 of 3 ( 94% confidence (FDR = 0.057))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.