Insertion junction: CLIP2.055872_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.055872
Chromosome:chromosome 16
Location:1937173
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656150 (1 of 1) PTHR23504:SF1 - PROTEIN T25D3.4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCCAGGCCTGGCCATCATGTTCCCCATCACGCCCACCCTGGTGACCA
Internal bar code:GGCGCAAATAGCCTTCGTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3661
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACATTGCACAGCATCGC
Suggested primer 2:GTTGCGTTTCTTGACAGCGT