Insertion junction: CLIP2.051891_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051891
Chromosome:chromosome 16
Location:1936667
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656150 (1 of 1) PTHR23504:SF1 - PROTEIN T25D3.4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGGTGTCGTCCTTCACCATGACGCTGACGGCGGTGGCGGACCTGCTG
Internal bar code:TAGTGCAGTAGAGTGGCGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1073
LEAP-Seq percent confirming:5.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACTACTGGTGCTGAAGCCAC
Suggested primer 2:GTTGCGTTTCTTGACAGCGT