Insertion junction: CLIP2.023599_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023599
Chromosome:chromosome 16
Location:1936767
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656150 (1 of 1) PTHR23504:SF1 - PROTEIN T25D3.4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCCCCTGTTCTCTCCTGTAAGCTTCTGGTCTTGCCCCTGACCCCTGG
Internal bar code:GCCAAACTCGGTGTCCTGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2938
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCGTTTCTTGACAGCGT
Suggested primer 2:ATACACACACTCACCCGCAG