Insertion junction: CLIP2.055872_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.055872
Chromosome:chromosome 16
Location:1937172
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656150 (1 of 1) PTHR23504:SF1 - PROTEIN T25D3.4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTGCAAGGCAGGTGGTTGGCGTCAGGGGTCGGAGCGAACGGGGGCGC
Internal bar code:GGCGCAAATAGCCTTCGTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1215
LEAP-Seq percent confirming:47.0588
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCGTTTCTTGACAGCGT
Suggested primer 2:CCTACATTGCACAGCATCGC