Insertion junction: CLIP2.011580_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011580
Chromosome:chromosome 12
Location:9310430
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542250 TUB1,RSP19 (1 of 2) K07375 - tubulin beta (TUBB); beta-1 tubulin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGGGGCACCTGGCCCGGCAATCGCCGCGCCCAGCCAACGCTTCCAGC
Internal bar code:CTTTTCTAGGATAGCCCTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3637
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGCGTGTGATAGCAATG
Suggested primer 2:CATCACAGCTGTAATGGCGC