Gene: Cre12.g542250

Overview

Common name:TUB1,RSP19
Defline:(1 of 2) K07375 - tubulin beta (TUBB); beta-1 tubulin
Description:GI:167458; major constituent of microtubules [PMID: 3460413, PMID: 6098820]; it binds one mole of GTP that is hydrolyzed and alters dynamic instability of the microtubule cytoskeleton
Synonyms:g13727.t1,RSP19
Chromosome:chromosome 12

Protein Localization

A plasmid for expressing Cre12.g542250 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g542250-Venus-3xFLAG

No localization data is available in our datasets for this protein.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.007889_1 CLIP2.007889 intron 80 6.1
CLIP2.007889_2 CLIP2.007889 intron 80 6.1
CLIP2.011580_2 CLIP2.011580 3'UTR 80 6.1
CLIP2.011580_3 CLIP2.011580 3'UTR 80 6.1
CLIP2.023246_1 CLIP2.023246 intron 80 6.1
CLIP2.023246_2 CLIP2.023246 intron 80 6.1
CLIP2.030792_1 CLIP2.030792 intron 80 6.1
CLIP2.030792_2 CLIP2.030792 intron 80 6.1
CLIP2.037306_3 CLIP2.037306 5'UTR 80 6.1
CLIP2.037306_4 CLIP2.037306 5'UTR 80 6.1
CLIP2.038536_1 CLIP2.038536 3'UTR 80 6.1
CLIP2.038536_2 CLIP2.038536 3'UTR 80 6.1
CLIP2.041959_1 CLIP2.041959 intron 80 6.1
CLIP2.041959_2 CLIP2.041959 intron 80 6.1
CLIP2.053034_1 CLIP2.053034 CDS 80 6.1
CLIP2.053034_2 CLIP2.053034 CDS 80 6.1
CLIP2.062791_1 CLIP2.062791 3'UTR 80 6.1
CLIP2.062791_2 CLIP2.062791 3'UTR 80 6.1
CLIP2.063790_1 CLIP2.063790 3'UTR 80 6.1
CLIP2.063790_2 CLIP2.063790 3'UTR 80 6.1
CLIP2.068143_2 CLIP2.068143 5'UTR 80 6.1
CLIP2.068143_3 CLIP2.068143 5'UTR 80 6.1
CLIP2.075671_1 CLIP2.075671 intron 63 6.1
CLIP2.078604_1 CLIP2.078604 5'UTR 80 6.1
LMJ.RY0402.047343_1 LMJ.RY0402.047343 CDS 58 5.5
LMJ.RY0402.070753_1 LMJ.RY0402.070753 intron 95 5.5
LMJ.RY0402.070753_2 LMJ.RY0402.070753 intron 95 5.5
LMJ.RY0402.076081_2 LMJ.RY0402.076081 5'UTR 73 5.5
LMJ.RY0402.104394_2 LMJ.RY0402.104394 CDS 73 5.5
LMJ.RY0402.110700_1 LMJ.RY0402.110700 CDS 95 5.5
LMJ.RY0402.110700_2 LMJ.RY0402.110700 CDS 95 5.5
LMJ.RY0402.130352_2 LMJ.RY0402.130352 5'UTR 95 5.5
LMJ.RY0402.144842_1 LMJ.RY0402.144842 CDS 58 5.5
LMJ.RY0402.146311_1 LMJ.RY0402.146311 intron 73 5.5
LMJ.RY0402.148212_1 LMJ.RY0402.148212 5'UTR 58 5.5
LMJ.RY0402.155008_2 LMJ.RY0402.155008 3'UTR 73 5.5
LMJ.RY0402.162329_1 LMJ.RY0402.162329 CDS 73 5.5
LMJ.RY0402.184107_1 LMJ.RY0402.184107 5'UTR 95 5.5
LMJ.RY0402.184107_2 LMJ.RY0402.184107 5'UTR 95 5.5
LMJ.RY0402.199436_1 LMJ.RY0402.199436 5'UTR 95 5.5
LMJ.RY0402.199436_2 LMJ.RY0402.199436 5'UTR 95 5.5
LMJ.RY0402.210839_1 LMJ.RY0402.210839 intron 73 5.5
LMJ.RY0402.222189_1 LMJ.RY0402.222189 5'UTR 95 5.5
LMJ.RY0402.222189_2 LMJ.RY0402.222189 5'UTR 95 5.5
LMJ.RY0402.236675_1 LMJ.RY0402.236675 CDS 58 5.5
LMJ.RY0402.239077_2 LMJ.RY0402.239077 5'UTR 73 5.5
LMJ.RY0402.252051_1 LMJ.RY0402.252051 CDS 58 5.5

Gene Annotations

PFAM:PF00091, PF03953
PANTHER: PTHR11588 PTHR11588:SF72
KEGG_ec:EC:2.4.2.1
KEGG_orthology:K07375
KOG:KOG1375
Gene ontology terms::GO:0000930, GO:0003924, GO:0005200, GO:0005525, GO:0005874, GO:0007017, GO:0007020, GO:0031122, GO:0043234, GO:0051258
Best arabidopsis TAIR name:AT5G62700
Best arabidopsis TAIR symbol:TUB2
Best arabidopsis TAIR defline:tubulin beta chain 3
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 2 of 6 ( 93% confidence (FDR = 0.066))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.