Insertion junction: CLIP2.037306_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.037306
Chromosome:chromosome 12
Location:9307871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542250 TUB1,RSP19 (1 of 2) K07375 - tubulin beta (TUBB); beta-1 tubulin 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAGGCCTTCACGTATGAAGGTCCTGGCAGCCCTTTGTTTAAAGTATGA
Internal bar code:CTTTTGGTTGGAGCTTTTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:633
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCACTCCTTGAATTCCCT
Suggested primer 2:GGTGGCCTCGTTGAAGTACA