Insertion junction: CLIP2.038536_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038536
Chromosome:chromosome 12
Location:9310616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g542200 3'UTR
Cre12.g542250 TUB1,RSP19 (1 of 2) K07375 - tubulin beta (TUBB); beta-1 tubulin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTTAGGAGACGGTACCGGTATCCAGGATGCAGCTGACACCTTCATGCC
Internal bar code:TATGCCAACGTCGATAGCAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3179
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CATCACAGCTGTAATGGCGC
Suggested primer 2:CGTGGCGTGTGATAGCAATG