Insertion junction: CLIP2.011940_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011940
Chromosome:chromosome 3
Location:2346628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158200 HDA2 (1 of 1) K11418 - histone deacetylase 11 (HDAC11); RPD3/HDA1 type histone deacetylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAAGAACTTCATTGCCGTGTCTCGGGCGTCGCGCCGGCTTGCCTGCTG
Internal bar code:TTACGTGACCATTATTTAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1127
LEAP-Seq percent confirming:88.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGTACAACACCCAGTGC
Suggested primer 2:CTTGTCATGCATCGCCGAAG