| Common name: | HDA2 |
| Defline: | (1 of 1) K11418 - histone deacetylase 11 (HDAC11); RPD3/HDA1 type histone deacetylase |
| Description: | Class III RPD3 type protein of the histone deacetylases (RPD3/HDA1 superfamily); ChromDB HDA3407 |
| Synonyms: | g3238.t1,HDA2,Cre03.g158200.t1.1 |
| Chromosome: | chromosome 3 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.011940_1 | CLIP2.011940 | CDS | 80 | 6.1 |
| CLIP2.011940_2 | CLIP2.011940 | CDS | 80 | 6.1 |
| CLIP2.032861_1 | CLIP2.032861 | intron | 80 | 6.1 |
| CLIP2.032861_2 | CLIP2.032861 | intron | 80 | 6.1 |
| CLIP2.039337_1 | CLIP2.039337 | intron | 80 | 6.1 |
| CLIP2.039337_2 | CLIP2.039337 | intron | 80 | 6.1 |
| CLIP2.040920_1 | CLIP2.040920 | intron | 80 | 6.1 |
| CLIP2.040920_2 | CLIP2.040920 | intron | 80 | 6.1 |
| CLIP2.065227_1 | CLIP2.065227 | 5'UTR | 80 | 6.1 |
| CLIP2.065227_2 | CLIP2.065227 | 5'UTR | 80 | 6.1 |
| CLIP2.065885_1 | CLIP2.065885 | 5'UTR | 80 | 6.1 |
| LMJ.RY0402.100208_1 | LMJ.RY0402.100208 | intron | 73 | 5.5 |
| LMJ.RY0402.127120_1 | LMJ.RY0402.127120 | intron | 95 | 5.5 |
| LMJ.RY0402.184049_1 | LMJ.RY0402.184049 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.184049_2 | LMJ.RY0402.184049 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.197408_1 | LMJ.RY0402.197408 | CDS | 58 | 5.5 |
| LMJ.RY0402.197408_2 | LMJ.RY0402.197408 | intron | 73 | 5.5 |
| LMJ.RY0402.201667_2 | LMJ.RY0402.201667 | intron | 73 | 5.5 |
| LMJ.RY0402.239731_1 | LMJ.RY0402.239731 | 5'UTR | 73 | 5.5 |
| PFAM: | PF00850 |
| PANTHER: | PTHR10625 PTHR10625:SF112 |
| KEGG_ec: | EC:3.5.1.98 |
| KEGG_orthology: | K11418 |
| KOG: | |
| Gene ontology terms:: | GO:0042309, GO:0050825, GO:0050826 |
| Best arabidopsis TAIR name: | AT5G26040 |
| Best arabidopsis TAIR symbol: | HDA2 |
| Best arabidopsis TAIR defline: | histone deacetylase 2 |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.