Insertion junction: CLIP2.032861_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.032861
Chromosome:chromosome 3
Location:2344952
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158200 HDA2 (1 of 1) K11418 - histone deacetylase 11 (HDAC11); RPD3/HDA1 type histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTCCCATGGCCCTCCTCTCAGCCGGCCTTGTTGCAGCTATCCTGCCTG
Internal bar code:AGCGAGAAGGGTTGCTTAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:153
LEAP-Seq percent confirming:58.8235
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTAGCCTCCTCACCTGA
Suggested primer 2:GGCGTTGTACATGTCCAGGA