Insertion junction: CLIP2.040920_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040920
Chromosome:chromosome 3
Location:2344011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158200 HDA2 (1 of 1) K11418 - histone deacetylase 11 (HDAC11); RPD3/HDA1 type histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCTGCCGTATCACAAGCGATCACCGCGCAACCCCGCCGCTGCCCACC
Internal bar code:ATGTTTACCGGCGTTGTCTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1055
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:TACACACACCACCGACACAG
Suggested primer 2:CGCCCACCTGACCTATACAC