Insertion junction: CLIP2.039337_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039337
Chromosome:chromosome 3
Location:2343072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158200 HDA2 (1 of 1) K11418 - histone deacetylase 11 (HDAC11); RPD3/HDA1 type histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCACACAGTGGTGGCATCCCTGGCGCGGGGGTTGGCGGCCAACAGGAC
Internal bar code:CGGAAGCGCACTGGCTACTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1993
LEAP-Seq percent confirming:94.3925
LEAP-Seq n confirming:101
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:107

Suggested primers for confirmation by PCR

Suggested primer 1:CATATGCCAACTCTGCACGC
Suggested primer 2:AACATTGCCACACGCTGTTC