Insertion junction: CLIP2.011940_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011940
Chromosome:chromosome 3
Location:2346629
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158200 HDA2 (1 of 1) K11418 - histone deacetylase 11 (HDAC11); RPD3/HDA1 type histone deacetylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATGGAGCCTGAACGCTAGAGCTGGGGAAAGCTCGCGCGCCTGCACAA
Internal bar code:TTACGTGACCATTATTTAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1507
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTCATGCATCGCCGAAG
Suggested primer 2:TACCGTACAACACCCAGTGC