Insertion junction: CLIP2.039337_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039337
Chromosome:chromosome 3
Location:2343061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158200 HDA2 (1 of 1) K11418 - histone deacetylase 11 (HDAC11); RPD3/HDA1 type histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGCTCCCACCTGGGCAGATGCATGCTCCCCCGCATGGACTAGTTTAT
Internal bar code:GTCCTAAAGGTTATGATTTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3398
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AACATTGCCACACGCTGTTC
Suggested primer 2:CATATGCCAACTCTGCACGC