Insertion junction: CLIP2.011968_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011968
Chromosome:chromosome 1
Location:1799326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010050 (1 of 18) 3.5.1.98 - Histone deacetylase / HDAC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCATCCCACGCGCTCAGAACACTATTATTATAACCAAAACAATCACAT
Internal bar code:CACCGCTTTGTGTTGCCTCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:150
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGCAGCATCTACAGCAG
Suggested primer 2:TGCTAGCAGATACGTCGCTG