Insertion junction: CLIP2.012012_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012012
Chromosome:chromosome 3
Location:1960726
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155450 (1 of 3) PF01167 - Tub family (Tub) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAATGCCGCCGCCGCCGCCGCCACCGCCGCCGCCGTAGCTGCCGCCTG
Internal bar code:TGCTGTCTGAGTAATTCATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1981
LEAP-Seq percent confirming:98.1651
LEAP-Seq n confirming:107
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:TAACCACTACCCCACAACGC
Suggested primer 2:CCCATCCAACCCAAATCCGA