Insertion junction: CLIP2.012142_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012142
Chromosome:chromosome 8
Location:2539299
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372800 (1 of 1) K12830 - splicing factor 3B subunit 3 (SF3B3, SAP130, RSE1); Nuclear pre-mRNA splicing factor involved in polyadenylation, CPSF family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTGTGCACGGTGCTGAAAGTGTCTAAGCATTAAACAGTGTATGCGTG
Internal bar code:TACGTTGATCCTTACACAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:618
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAATGGTTGGCGCAAAC
Suggested primer 2:CCGCAATCATCTGCTGCTTC