Gene: Cre08.g372800

Overview

Common name:
Defline:	(1 of 1) K12830 - splicing factor 3B subunit 3 (SF3B3, SAP130, RSE1); Nuclear pre-mRNA splicing factor involved in polyadenylation, CPSF family
Description:	CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs
Synonyms:	g8731.t1
Chromosome:	chromosome 8

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.012142_1	CLIP2.012142	intron	80	6.1
CLIP2.012142_2	CLIP2.012142	intron	80	6.1
CLIP2.028150_1	CLIP2.028150	CDS	80	6.1
CLIP2.028196_1	CLIP2.028196	intron	80	6.1
CLIP2.044259_1	CLIP2.044259	intron	80	6.1
CLIP2.061314_1	CLIP2.061314	3'UTR	80	6.1
CLIP2.065354_2	CLIP2.065354	intron	63	6.1
CLIP2.065868_1	CLIP2.065868	3'UTR	80	6.1
CLIP2.076105_1	CLIP2.076105	3'UTR	80	6.1
CLIP2.076105_2	CLIP2.076105	3'UTR	80	6.1
LMJ.RY0402.042547_1	LMJ.RY0402.042547	3'UTR	95	5.5
LMJ.RY0402.042547_2	LMJ.RY0402.042547	3'UTR	95	5.5
LMJ.RY0402.098623_1	LMJ.RY0402.098623	3'UTR	95	5.5
LMJ.RY0402.098623_2	LMJ.RY0402.098623	3'UTR	95	5.5
LMJ.RY0402.185242_1	LMJ.RY0402.185242	3'UTR	73	5.5
LMJ.RY0402.213321_3	LMJ.RY0402.213321	3'UTR	73	5.5

Gene Annotations

PFAM:	PF03178, PF10433
PANTHER:	PTHR10644 PTHR10644:SF1
KEGG_ec:
KEGG_orthology:	K12830
KOG:	KOG1898
Gene ontology terms::	GO:0003676, GO:0005515, GO:0005634
Best arabidopsis TAIR name:	AT3G55200
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:	Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.