Insertion junction: CLIP2.028196_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028196
Chromosome:chromosome 8
Location:2536842
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372800 (1 of 1) K12830 - splicing factor 3B subunit 3 (SF3B3, SAP130, RSE1); Nuclear pre-mRNA splicing factor involved in polyadenylation, CPSF family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGATTAGCCCCCCCCACTCAGCTTCTTTACCAACGAGCCTTACTTATC
Internal bar code:TGAGCAGGGACACGCGCCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1359
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTTAACGCACAGTCCCCC
Suggested primer 2:ATGAAAACGTTGGGTTGGCG