Insertion junction: CLIP2.012302_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012302
Chromosome:chromosome 4
Location:1872758
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218150 PPH1,PPP18 Thylakoid phosphoprotein phosphatase 2C-related; (1 of 70) 3.1.3.16 - Protein-serine/threonine phosphatase / Serine/threonine specific protein phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATCGAGGATGAGGCGGGAGCTTGGACTTAGCGGCCAGGAGTAGCGAC
Internal bar code:GAACCACTGATAGAGTAGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:486
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCAACAAAACGGAGCCC
Suggested primer 2:CTGGTCAACAGCAAACAGGC