Insertion junction: CLIP2.012484_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012484
Chromosome:chromosome 12
Location:3145377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500600 VMA21 (1 of 1) PF09446 - VMA21-like domain (VMA21); vacuolar ATPase assembly factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAAGGACCAAGGAAGCTTGCTGAGCACGCCTGGAGCGATGAAGGCGCTC
Internal bar code:ATTGTAGGTTCGGTAAGTAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4084
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCGCTCTTTGCAACGAA
Suggested primer 2:CGCAGGTTGTGGTCAAAGTG