Insertion junction: CLIP2.012499_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012499
Chromosome:chromosome 1
Location:7673259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g053850 (1 of 2) K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGCTGTGGCCTAGCCCAGTCCAGTCTGATCGGTTACGCGTGCCACGT
Internal bar code:GTCAGAAAGAAGATCGCCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1838
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGTTGAAGATGCGTGCA
Suggested primer 2:GAATCCGTATGCCGACGTCT