Insertion junction: CLIP2.012572_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.012572
Chromosome:chromosome 12
Location:5410134
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529350 SMM42 (1 of 1) 2.1.1.163//2.1.1.201 - Demethylmenaquinone methyltransferase / Demethylmenaquinone C-methylase // 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; S-adenosyl-L-methionine-dependent methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTACTGCTCGTGCTGGCTGCCGGCGCTGGCTCGTCCTCCCGTGGGGGC
Internal bar code:TAGCGGCACTTATTAAGATAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:628
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCTTCGCAGTGTCTGGT
Suggested primer 2:GGGGCAGCAAGAGTGTTACT