Insertion junction: CLIP2.012633_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012633
Chromosome:chromosome 4
Location:2956628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224800 VAMP4,VAMP74,VAM4 (1 of 3) PTHR21136:SF4 - N-SYNAPTOBREVIN, ISOFORM J; Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACCCGCATACTCCGCGAGCGCCACAGAGCCCTGGCATACGCTTACAT
Internal bar code:TCAGTATAGTAGCTTAGCAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2208
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCGTTGTTGTGCACAAG
Suggested primer 2:TGAGTGCTCACTGAGTGCTG