Gene: Cre04.g224800

Overview

Common name:VAMP4,VAMP74,VAM4
Defline:(1 of 3) PTHR21136:SF4 - N-SYNAPTOBREVIN, ISOFORM J; Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III)
Description:Expressed Protein, similar to VAMP7 R-SNAREs, involved in Golgi/PM and Golgi/endosomal trafficking; most similar to VAMP72-family of land plants; part of a 4-member gene family in Chlamydomonas all on same scaffold and in 2 tandem pairs, location and order of gene family members are syntenic in Volvox
Synonyms:g4906.t1,Cre04.g224800.t1.1,VAM4,VAMP74
Chromosome:chromosome 4

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.000777_1 CLIP2.000777 intron 80 6.1
CLIP2.000777_2 CLIP2.000777 intron 80 6.1
CLIP2.002465_1 CLIP2.002465 CDS 80 6.1
CLIP2.002465_2 CLIP2.002465 CDS 80 6.1
CLIP2.002797_1 CLIP2.002797 intron 80 6.1
CLIP2.006918_2 CLIP2.006918 intron 80 6.1
CLIP2.006918_3 CLIP2.006918 intron 80 6.1
CLIP2.007450_1 CLIP2.007450 CDS 80 6.1
CLIP2.012633_1 CLIP2.012633 intron 80 6.1
CLIP2.012633_2 CLIP2.012633 intron 80 6.1
CLIP2.012926_1 CLIP2.012926 CDS 80 6.1
CLIP2.012926_2 CLIP2.012926 CDS 80 6.1
CLIP2.013737_3 CLIP2.013737 intron 80 6.1
CLIP2.013737_4 CLIP2.013737 intron 80 6.1
CLIP2.014072_1 CLIP2.014072 CDS 63 6.1
CLIP2.014200_1 CLIP2.014200 CDS 80 6.1
CLIP2.014200_2 CLIP2.014200 CDS 80 6.1
CLIP2.014495_2 CLIP2.014495 intron 80 6.1
CLIP2.014495_3 CLIP2.014495 intron 80 6.1
CLIP2.014608_1 CLIP2.014608 intron 80 6.1
CLIP2.014608_2 CLIP2.014608 intron 80 6.1
CLIP2.017089_3 CLIP2.017089 intron 80 6.1
CLIP2.018164_1 CLIP2.018164 intron 80 6.1
CLIP2.018164_2 CLIP2.018164 intron 80 6.1
CLIP2.020800_3 CLIP2.020800 intron 80 6.1
CLIP2.020800_4 CLIP2.020800 intron 80 6.1
CLIP2.023298_1 CLIP2.023298 CDS 80 6.1
CLIP2.023298_2 CLIP2.023298 CDS 80 6.1
CLIP2.024990_1 CLIP2.024990 CDS 80 6.1
CLIP2.024990_2 CLIP2.024990 CDS 80 6.1
CLIP2.035767_1 CLIP2.035767 intron 80 6.1
CLIP2.035767_2 CLIP2.035767 intron 80 6.1
CLIP2.037504_1 CLIP2.037504 intron 80 6.1
CLIP2.042002_1 CLIP2.042002 CDS 80 6.1
CLIP2.042002_2 CLIP2.042002 CDS 80 6.1
CLIP2.047638_1 CLIP2.047638 CDS 80 6.1
CLIP2.047638_2 CLIP2.047638 CDS 80 6.1
CLIP2.049013_1 CLIP2.049013 intron 80 6.1
CLIP2.054987_2 CLIP2.054987 CDS 80 6.1
CLIP2.054987_3 CLIP2.054987 CDS 80 6.1
CLIP2.055646_1 CLIP2.055646 intron 80 6.1
CLIP2.055646_2 CLIP2.055646 intron 80 6.1
CLIP2.060774_1 CLIP2.060774 intron 80 6.1
CLIP2.060774_2 CLIP2.060774 intron 80 6.1
CLIP2.062982_1 CLIP2.062982 intron 63 6.1
CLIP2.063971_1 CLIP2.063971 CDS 80 6.1
CLIP2.063971_2 CLIP2.063971 CDS 80 6.1
CLIP2.065539_1 CLIP2.065539 intron 80 6.1
CLIP2.065539_2 CLIP2.065539 intron 80 6.1
CLIP2.067821_1 CLIP2.067821 intron 63 6.1
CLIP2.071948_1 CLIP2.071948 CDS 40 6.1
CLIP2.071948_2 CLIP2.071948 CDS 63 6.1
CLIP2.072225_1 CLIP2.072225 intron 80 6.1
CLIP2.073017_3 CLIP2.073017 intron 80 6.1
CLIP2.073017_4 CLIP2.073017 intron 80 6.1
CLIP2.074213_1 CLIP2.074213 intron 80 6.1
CLIP2.074213_2 CLIP2.074213 intron 80 6.1
CLIP2.076266_1 CLIP2.076266 intron 80 6.1
CLIP2.076266_2 CLIP2.076266 intron 80 6.1
CLIP2.077923_1 CLIP2.077923 intron 63 6.1
LMJ.RY0402.039473_1 LMJ.RY0402.039473 5'UTR 95 5.5
LMJ.RY0402.039473_2 LMJ.RY0402.039473 5'UTR 95 5.5
LMJ.RY0402.039795_1 LMJ.RY0402.039795 5'UTR 95 5.5
LMJ.RY0402.043765_1 LMJ.RY0402.043765 CDS 95 5.5
LMJ.RY0402.043765_2 LMJ.RY0402.043765 intron 95 5.5
LMJ.RY0402.052381_1 LMJ.RY0402.052381 3'UTR 73 5.5
LMJ.RY0402.080797_1 LMJ.RY0402.080797 5'UTR 73 5.5
LMJ.RY0402.082894_1 LMJ.RY0402.082894 CDS 73 5.5
LMJ.RY0402.092036_2 LMJ.RY0402.092036 3'UTR 95 5.5
LMJ.RY0402.092522_1 LMJ.RY0402.092522 CDS/intron 73 5.5
LMJ.RY0402.095818_1 LMJ.RY0402.095818 CDS 95 5.5
LMJ.RY0402.095818_2 LMJ.RY0402.095818 CDS 95 5.5
LMJ.RY0402.100303_1 LMJ.RY0402.100303 intron 95 5.5
LMJ.RY0402.100303_2 LMJ.RY0402.100303 5'UTR 95 5.5
LMJ.RY0402.100303_3 LMJ.RY0402.100303 5'UTR 95 5.5
LMJ.RY0402.102842_3 LMJ.RY0402.102842 CDS 73 5.5
LMJ.RY0402.105639_1 LMJ.RY0402.105639 CDS 95 5.5
LMJ.RY0402.105639_2 LMJ.RY0402.105639 CDS 95 5.5
LMJ.RY0402.115834_1 LMJ.RY0402.115834 intron 58 5.5
LMJ.RY0402.126190_1 LMJ.RY0402.126190 3'UTR 73 5.5
LMJ.RY0402.132922_1 LMJ.RY0402.132922 CDS 58 5.5
LMJ.RY0402.138611_1 LMJ.RY0402.138611 CDS 95 5.5
LMJ.RY0402.138611_2 LMJ.RY0402.138611 intron 95 5.5
LMJ.RY0402.138611_3 LMJ.RY0402.138611 intron 95 5.5
LMJ.RY0402.141826_1 LMJ.RY0402.141826 CDS 95 5.5
LMJ.RY0402.141826_2 LMJ.RY0402.141826 CDS 95 5.5
LMJ.RY0402.144402_1 LMJ.RY0402.144402 CDS 95 5.5
LMJ.RY0402.144402_2 LMJ.RY0402.144402 CDS 95 5.5
LMJ.RY0402.147690_1 LMJ.RY0402.147690 3'UTR 73 5.5
LMJ.RY0402.152589_1 LMJ.RY0402.152589 intron 73 5.5
LMJ.RY0402.156259_1 LMJ.RY0402.156259 3'UTR 95 5.5
LMJ.RY0402.156259_2 LMJ.RY0402.156259 3'UTR 95 5.5
LMJ.RY0402.167948_1 LMJ.RY0402.167948 5'UTR 95 5.5
LMJ.RY0402.167948_2 LMJ.RY0402.167948 5'UTR 95 5.5
LMJ.RY0402.168640_1 LMJ.RY0402.168640 intron 73 5.5
LMJ.RY0402.171446_1 LMJ.RY0402.171446 intron 95 5.5
LMJ.RY0402.171446_2 LMJ.RY0402.171446 5'UTR 95 5.5
LMJ.RY0402.185442_4 LMJ.RY0402.185442 CDS 58 5.5
LMJ.RY0402.185904_2 LMJ.RY0402.185904 CDS 58 5.5
LMJ.RY0402.192111_1 LMJ.RY0402.192111 intron 73 5.5
LMJ.RY0402.209795_1 LMJ.RY0402.209795 intron 58 5.5
LMJ.RY0402.209795_2 LMJ.RY0402.209795 5'UTR 73 5.5
LMJ.RY0402.214601_1 LMJ.RY0402.214601 5'UTR 73 5.5
LMJ.RY0402.229177_2 LMJ.RY0402.229177 CDS 73 5.5
LMJ.RY0402.229177_3 LMJ.RY0402.229177 intron 73 5.5
LMJ.RY0402.230077_1 LMJ.RY0402.230077 intron 73 5.5
LMJ.RY0402.230783_1 LMJ.RY0402.230783 intron 95 5.5
LMJ.RY0402.230783_2 LMJ.RY0402.230783 intron 95 5.5
LMJ.RY0402.237939_1 LMJ.RY0402.237939 CDS 95 5.5
LMJ.RY0402.237939_2 LMJ.RY0402.237939 CDS 95 5.5
LMJ.RY0402.250199_1 LMJ.RY0402.250199 CDS 95 5.5
LMJ.RY0402.250199_2 LMJ.RY0402.250199 CDS 95 5.5
LMJ.RY0402.255998_2 LMJ.RY0402.255998 5'UTR 73 5.5
LMJ.SG0182.000401_1 LMJ.SG0182.000401 intron 75 5.3
LMJ.SG0182.019047_1 LMJ.SG0182.019047 CDS 75 5.3

Gene Annotations

PFAM:PF00957, PF13774
PANTHER: PTHR21136 PTHR21136:SF4
KEGG_ec:
KEGG_orthology:
KOG:KOG0859
Gene ontology terms::GO:0006810, GO:0016021, GO:0016192
Best arabidopsis TAIR name:AT1G04760.1
Best arabidopsis TAIR symbol:ATVAMP726,VAMP726
Best arabidopsis TAIR defline:vesicle-associated membrane protein 726
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.