Insertion junction: LMJ.RY0402.039473_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.039473
Chromosome:chromosome 4
Location:2957533
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g224800 VAMP4,VAMP74,VAM4 (1 of 3) PTHR21136:SF4 - N-SYNAPTOBREVIN, ISOFORM J; Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATACGGCTGCTGTCTTCAATCGTCGGG
Internal bar code:AACTGCTGAACGAGGGTTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:772
LEAP-Seq percent confirming:99.4413
LEAP-Seq n confirming:8900
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGGTTTTGTCCGTCAGG
Suggested primer 2:GTGTTTGGTTGCATGTTTGC