Insertion junction: CLIP2.012926_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012926
Chromosome:chromosome 4
Location:2955935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224800 VAMP4,VAMP74,VAM4 (1 of 3) PTHR21136:SF4 - N-SYNAPTOBREVIN, ISOFORM J; Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGAGGGCAAGAGCCGATACGAGGTTGATGGCCACTCCCTGAACTTCC
Internal bar code:TGCGGGTGCCGTCGCCCGTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1439
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTCCTCGGTCTTCTCCT
Suggested primer 2:GTATTCCATTGCAGCTGCCG