Insertion junction: CLIP2.012700_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.012700
Chromosome:chromosome 16
Location:7526118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682699 3'UTR_intron
Cre16.g682811 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCTGGGGCCGTGGGTGGTCGCCACCAGCATCACACCGCGCTGGGCGA
Internal bar code:TACTTTTTCGTTTGACTTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2285
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACGGTAGCGTTGGATCC
Suggested primer 2:CCACACAAGGAACGTGCAAG