Insertion junction: CLIP2.012700_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.012700
Chromosome:chromosome 16
Location:7526120
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682699 3'UTR_intron
Cre16.g682811 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGGCGCTGCTTCGCAACCACACCCTCAACCCGCTGCTGGGCGGCATC
Internal bar code:CGCGATGCATGATTAAACTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2411
LEAP-Seq percent confirming:23.5294
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCACACAAGGAACGTGCAAG
Suggested primer 2:CCTACGGTAGCGTTGGATCC