Insertion junction: CLIP2.012818_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.012818
Chromosome:chromosome 9
Location:2978079
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393358 VIG1 Vasa-intronic gene homolog; (1 of 1) K13199 - plasminogen activator inhibitor 1 RNA-binding protein (SERBP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTGCTTTTGCTTCGCAGCCACGAGACCGAGAAGCGCCACGGCAGCGG
Internal bar code:TTGCGTCCAATGGGGGTTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1767
LEAP-Seq percent confirming:69.697
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGTGACTTCGAAAGCCC
Suggested primer 2:CAGGATTGAATGAAGGCGCG