Insertion junction: CLIP2.013044_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013044
Chromosome:chromosome 11
Location:2672786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095074 VPS11,ROC12 (1 of 1) PTHR23323//PTHR23323:SF24 - VACUOLAR MEMBRANE PROTEIN RELATED // VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 11 HOMOLOG; Subunit of VPS-C complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACCACAAAGCTTGCCACGTCACATGCACACATGCACATGCAGCACAC
Internal bar code:CAATTAGGGTATAGATGGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1048
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTACACACACACACACAC
Suggested primer 2:GATAGGGGGATGGGGGAGTT