| Common name: | VPS11,ROC12 |
| Defline: | (1 of 1) PTHR23323//PTHR23323:SF24 - VACUOLAR MEMBRANE PROTEIN RELATED // VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 11 HOMOLOG; Subunit of VPS-C complex |
| Description: | Hypothetical conserved protein. Similar to VPS11 (vacuolar protein sorting-associated protein 11)-type proteins; Matsuo et al.'s (2008) roc12 (rhythm of chloroplast 12) circadian bioluminescence rhythm mutant locus maps here [PMID: 18334618] |
| Synonyms: | g1848.t1,Cre11.g471400.t1.2,ROC12,VPS11,Cre11.g471400.t1.1 |
| Chromosome: | chromosome 11 (genome version v6.1), chromosome 2 (genome version v5.5) |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.009123_1 | CLIP2.009123 | intron | 80 | 6.1 |
| CLIP2.009123_2 | CLIP2.009123 | intron | 80 | 6.1 |
| CLIP2.010281_1 | CLIP2.010281 | intron | 80 | 6.1 |
| CLIP2.010281_2 | CLIP2.010281 | intron | 80 | 6.1 |
| CLIP2.013044_1 | CLIP2.013044 | intron | 80 | 6.1 |
| CLIP2.013044_2 | CLIP2.013044 | intron | 80 | 6.1 |
| CLIP2.033267_1 | CLIP2.033267 | intron | 80 | 6.1 |
| CLIP2.033267_2 | CLIP2.033267 | intron | 80 | 6.1 |
| CLIP2.045192_1 | CLIP2.045192 | intron | 80 | 6.1 |
| CLIP2.045192_2 | CLIP2.045192 | intron | 80 | 6.1 |
| CLIP2.045414_1 | CLIP2.045414 | intron | 40 | 6.1 |
| LMJ.RY0402.094905_1 | LMJ.RY0402.094905 | CDS | 58 | 5.5 |
| LMJ.RY0402.176930_1 | LMJ.RY0402.176930 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.181633_1 | LMJ.RY0402.181633 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.188252_1 | LMJ.RY0402.188252 | intron | 73 | 5.5 |
| PFAM: | PF12451 |
| PANTHER: | PTHR23323 PTHR23323:SF24 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG2114 |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT2G05170 |
| Best arabidopsis TAIR symbol: | ATVPS11,VPS11 |
| Best arabidopsis TAIR defline: | vacuolar protein sorting 11 |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.