Insertion junction: CLIP2.013530_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013530
Chromosome:chromosome 3
Location:7317931
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206900 (1 of 1) IPR000719//IPR002290//IPR011009//IPR011989//IPR016024 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Armadillo-like helical // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGTGGGACGGCGAGGGGCGGCCATTGCCCATCCCAAGACGAGACCCA
Internal bar code:AAAGGAGCGATGGGCTGCCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:99
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGATATGCGCCACCACTAGC
Suggested primer 2:GCCTTTGCACACTCACCAAG