Insertion junction: CLIP2.013538_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013538
Chromosome:chromosome 2
Location:6420953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388350 MMP11,RAT2 Metalloproteinase of VMP family; (1 of 51) PF05548 - Gametolysin peptidase M11 (Peptidase_M11) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATGGAGGCCCCTACGGAGGCGGCTATGGAGCCTAGGCTGTGTGACCCC
Internal bar code:ACTATTCCCAGGTCTCCTCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1595
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCGCTATGTGGTGAAGC
Suggested primer 2:TACCGGTAGCATCTGACCCA